Visualize
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atomaton.visualize.bin_data(x_data, y_data, num_bins=10, val_range=None)
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atomaton.visualize.convert_images_to_gif(filenames, filename_final=None, fps=10)
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atomaton.visualize.draw_atoms(atoms, sf=0.125, opacity=1.0)
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atomaton.visualize.draw_bonds(atoms, all_bonds, all_bonds_across_boundary, bond_r=0.15, color=(0.4, 0.4, 0.4), opacity=1.0)
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atomaton.visualize.draw_unit_cell(cell_lengths, cell_angles, cell_r=0.15, color=(0.4, 0.4, 0.4), opacity=1.0)
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atomaton.visualize.view_structure(atoms, bonds, bonds_across_boundary, show_unit_cell=True, filename=None, interactive=True, figure={}, objects={}, camera={}, bond_energies=None, bond_cmap='Reds', bond_bins=5, e_range=None, opacity=1.0)